Encyclopedia results for RasMol

1. RasMol
   
   Infobox Software name RasMol logo screenshot caption collapsible author Roger A. Sayle developer Herbert ... 180px right thumb Example of rendering by RasMol. TRAF2 trimer PDB 1DOA RasMol is a computer program ..
   
   
   
   
2. Sirius visualization software
   
   Command line interpreter and scripting support fully compatible with existing RasMol scripts ... structures developed as a part of http mbt.sdsc.edu Molecular Biology Toolkit . RasMol compatible ..
   
   
   
   
3. Molden
   
   Visual Molecular Dynamics VMD Jmol RasMol External links http www.cmbi.ru.nl molden molden.html Molden ..
   
   
   
   
4. Single chain variable fragment
   
   Image Scfv1.png 320px thumb RasMol rendering of the structure of an immunoglobulin. Image ScFv rotation.gif 320px thumb Rotating scFv fragment with highlighted complementatity determining regions CDRs ..
   
   
   
   
5. CPK coloring
   
   http www.bio.cmu.edu Courses BiochemMols RasFrames CPKCLRS.HTM Rasmol color table Category Molecular ..
   
   
   
   
6. Software for molecular mechanics modeling
   
   qmol index.html QMOL Y Protein viewer http www.bernstein plus sons.com software rasmol RasMol Y ..
   
   
   
   
7. Structural bioinformatics
   
   applet with rasmol like scripting capabilities and Javascript interaction http propka.ki.ku.dk, PROPKA ..
   
   
   
   
8. MDL Chime
   
   acquired by Symyx Technologies from scientific publisher Elsevier in October 2007. It is based on the RasMol ..
   
   
   
   
9. Sequerome
   
   microbio rasmol Rasmol as structure viewers. In case of results from a Protein BLAST , PDB ids ... viewer e.g Cn3D , Rasmol .... Once the BLAST report is displayed on the Results pane, the user ..
   
   
   
   
10. ISIS/Draw
    
    a 2D drawing program, it has some 3D rotation features and can interface with Rasmol for 3D visualization ..
    
    
    
    
11. Protein Data Bank
    
    molecular dynamics VMD , RasMol , PyMOL , Jmol , MDL Chime , QuteMol , web browser VRML plugin ... http www.cbi.cnptia.embrapa.br SMS STING Home Page RasMol &mdash http www.openrasmol.org RasMol ..
    
    
    
    
12. Protein Data Bank (file format)
    
    software capable of displaying pdb files PyMOL RasMol Visual Molecular Dynamics VMD Gabedit Molden ..
    
    
    
    
13. Biopuppy
    
    mfold gibbs Protein Structure Analysis Tools Garlic Rasmol Phylogenetic Analysis tools Fast DNA Phylip ..
    
    
    
    
14. Molecular graphics
    
    his RasMol program into the public domain. RasMol contained a very high performance molecular renderer ... free http swift.cmbi.ru.nl servers based on it Sayle, Richardson 1992, 1993 RasMol , Kinemage Platform ..
    
    
    
    
15. List of file formats (alphabetical)
    
    local.wasp.uwa.edu.au pbourke dataformats alc alc3 Alchemy , RasMol ALG Activity Log ARCSOLO ALL Arts ... Publisher CIF Crystallographic Information File RasMol , Jmol CiM C Text Mode Image File The Ultimate ..
    
    
    
    
16. Crystallography
    
    macromolecules. Computer programs like RasMol or Pymol can be used to visualize biological molecular ..
    
    
    
    
17. Secondary structure
    
    whatif WhatIf Rasmol protein visualization program, implements DSSP http bioweb.pasteur.fr seqanal ..
    
    
    
    
18. Molecular model
    
    GPL open project management for nanostructures using Java http www.umass.edu microbio rasmol history.htm ..
    
    
    
    
19. History of cancer chemotherapy
    
    mesylate in red, rendered with RasMol Molecular and genetic approaches to understanding cell biology ..
    
    
    
    
20. HLA-DQ
    
    mmdb mmdbsrv.cgi?Dopt s&uid 17145 HLA DQ8 insulin peptide at NCBI can be view with Cn3D or Rasmol ..
    
    
    
    

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