. The genome sequence for any organism requires the DNA sequences for each of the chromosomes in an organism to be determined. For bacteria , which usually have just one chromosome, a genomeproject .... The Human GenomeProject was a landmark genomeproject that is already having a major impact on research .... ref cite web url http www.ornl.gov sci techresources Human Genomeproject benefits.shtml title Potential Benefits of Human GenomeProject Research publisher United States Department of Energy Department of Energy , Human GenomeProject Information date 2009 10 09 accessdate 2010 06 18 ref Genome ... Project , now that the genome sequences of human and several model organisms are largely complete ... GeneRIF RefSeq Uniprot Vertebrate and Genome Annotation Project Vertebrate and Genome Annotation Project Vega At Wikipedia, genome annotation has started to become automated under the auspices of the Portal ... F last8 Su first8 AI issue 7 pmc 2443188 ref When is a genomeproject finished? When Genome sequencing ... also be argued that a complete genomeproject should include the sequences of mitochondria and for plants ... of Human Genome Diversity Project human genetic diversity . Example genome projects main List of sequenced ... GenomeProject Many organisms have genome projects that have either been completed or will be completed shortly, including Human s, Homo sapiens see Human genomeproject Palaeo Eskimo , ref name ReferenceA an ancient human Neanderthal , Homo neanderthalensis partial see Neanderthal GenomeProject Common Chimpanzee Pan troglodytes see Chimpanzee GenomeProject Domestic Cow ref http www.eurekalert.org ... Human microbiome project International Grape Genome Program International HapMap Project See also ... Database http www.ncbi.nlm.nih.gov entrez query.fcgi?DB genomeprj GenomeProject Database http ... The sea urchin genome database genomics footer DEFAULTSORT GenomeProject Category Genome projects ...Genome projects are scientific endeavours that ultimately aim to determine the complete genome sequence ... more details
The Cancer GenomeProject , based at the Wellcome Trust Sanger Institute , aims to identify genetic variation sequence variant s mutation s critical in the development of human cancer s. Like The Cancer Genome Atlas project within the United States, the Cancer GenomeProject represents an effort in the War on Cancer to improve cancer diagnosis, treatment, and prevention through a better understanding of the molecular basis of this disease. The Cancer GenomeProject, led by Michael Stratton and Andy Futreal, combines knowledge of the human genome sequence with high throughput screening high throughput mutation detection techniques. See also Cancer genome sequencing The Cancer Genome Atlas and http cgap.nci.nih.gov The Cancer Genome Anatomy Project ref http www.cancer.gov cancertopics understandingcancer CGAP ref ref http www.ncbi.nlm.nih.gov ncicgap ref at the National Cancer Institute. International Cancer Genome Consortium COSMIC cancer database External links http www.sanger.ac.uk genetics CGP Cancer GenomeProject Official website http www.sciam.com article.cfm?id mapping the cancer genome Francis S. Collins and Anna D. Barker. Mapping the Cancer Genome . Scientific American, February 2007 References references genetics stub oncology stub sci org stub UK med org stub Category Human genome projects Category Wellcome Trust pt Projeto Genoma do C ncer ... more details
Infobox Organization name Floral GenomeProject image image border size caption map msize mcaption motto formation 2001 type Academic Research headquarters Penn State University br University of Florida br Cornell University location flagicon USA United States membership language leader title leader name key people num staff budget website http fgp.bio.psu.edu Official website The Floral GenomeProject is a collaborative research cooperation primarily between Penn State University , University of Florida , and Cornell University . The initial funding came from a grant of 7.4 million from the National Science Foundation . The Floral GenomeProject was initiated to bridge the genomic gap between the most broadly studied plant model systems. According to the http www.floralgenome.org website , the following are the aims of the project blockquote The Floral GenomeProject will investigate the origin, conservation, and diversification of the genetic architecture of the flower, and develop conceptual and real tools for evolutionary functional genomics in plants. blockquote External links http fgp.bio.psu.edu Official Website University of Florida Cornell University Category Genome projects Category Botany Category University of Florida Category Cornell University botany stub pl Floral GenomeProject ... more details
The Music GenomeProject was first conceived by Will Glaser and Tim Westergren in late 1999. In January 2000 they joined forces with Jon Kraft to found Pandora Radio Pandora Media to bring their idea to market. ref http venturevoice.com shows venturevoice54 tim westergren pandora.mp3 ref The Music GenomeProject was an effort to capture the essence of music at the fundamental level using list of Music GenomeProject attributes almost 400 attributes to describe songs and a complex mathematical algorithm to organize them. Under the direction of Nolan Gasser , the musical structure and implementation of the Music GenomeProject, made up of 5 Genomes Pop Rock Hip Hop Electronica Jazz World Music and Classical , was advanced and codified. A given song is represented by a coordinate vector vector a list of attributes containing approximately 400 genes analogy analogous to trait determining gene ... GenomeProject is a registered trademark in the United States. The mark is owned by Pandora Media, Inc. ref http tess2.uspto.gov bin showfield?f doc&state e3mah4.2.1 Music GenomeProject US Trademark No. 2731047 United States Patent Office ref The Music GenomeProject is covered by United States ... GenomeProject US Patent No. 7,003,515 ref This patent shows William T. Glaser, Timothy B. Westergren ... owned by Pandora Media, Inc. See also List of Music GenomeProject attributes Moodbar MusicBrainz ... GenomeProject &mdash short historical statement by Tim Westergren div reflist Further reading refbegin Citation last Castelluccio first Michael title The Music GenomeProject journal Strategic ... first Joyce title Pandora and the Music GenomeProject journal Scientific Computing volume 23 issue ... GenomeProject and Pandora video https sites.google.com site thefirstmusicofgenes home The first ... it Music GenomeProject he lt Muzikos genomo projektas pl Music GenomeProject ... genome project.aspx?terms music 20genome issn 1930 5753 accessdate 2008 08 03 http www.nytimes.com ... more details
The Personal GenomeProject PGP aims to publish the complete genomes and medical records of several volunteers, in order to enable research into personalized medicine . It was initiated by Harvard University s George Church and announced in January 2006. ref Emily Singer. http www.technologyreview.com BioTech Therapeutics wtr 16169,259,p1.html The Personal GenomeProject , Technology Review , 20 January 2006 ref ref cite news url http www.nytimes.com 2010 06 08 science 08church.html? r 1 title Scientist at Work George M. Church On a Mission to Sequence the Genomes of 100,000 People publisher The New York Times date 2010 06 07 accessdate 2010 08 18 first David last Duncan ref Volunteers are currently accepted only if they are US citizens and able to attend for screening in the US. The project will publish the genotype the full DNA sequence of all 46 chromosome s of the volunteers, along with extensive information about their phenotype medical records, various measurements, Magnetic resonance imaging MRI images, etc. All data will be freely available over the Internet , so that researchers .... http www.technologyreview.com Biotech 19824 Your Personal Genome , Technology Review , 6 December 2007 ref It s 2011. What s been done since 2007? See also Human GenomeProject References Reflist ... medtech stemcells magazine 16 08 ff church Wired How the Personal GenomeProject Could Unlock the Mysteries of Life Category Human genome projects de Personal GenomeProject es Personal GenomeProject ... of genes and environment environment and phenotype . An important part of the project will be the exploration ... and employers if the genome shows a predisposition for certain diseases. The Harvard Medical School ... for Genome Sciences and Policy ref Misha Angrist, Robert M. Cook Deegan http www.thenewatlantis.com archive 11 angristcook deegan.htm Who Owns the Genome? The New Atlantis, Number 11, Winter 2006, pp ... to redact their trait data before publication. He also announced that the project was about to expand ... more details
The Vertebrate and Genome Annotation Vega project provides manual curation of vertebrate genomes for the scientific community. ref cite journal author Ashurst JL, Chen CK, Gilbert JG, et al. title The Vertebrate Genome Annotation Vega database journal Nucleic Acids Research volume 33 issue Database issue pages D459 65 year 2005 month January pmid 15608237 pmc 540089 doi 10.1093 nar gki135 ref The Vega data repository is publicly available, regularly updated and includes GenomeprojectGenome annotation annotations of several finished vertebrate genome sequences human, mouse, zebrafish, pig and dog. ref cite journal author Loveland J title VEGA, the genome browser with a difference journal Briefings in Bioinformatics volume 6 issue 2 pages 189 93 year 2005 month June pmid 15975227 doi 10.1093 bib 6.2.189 ref The Vega website is built upon the Ensembl codebase. ref cite journal author Searle SM, Gilbert J, Iyer V, Clamp M title The otter annotation system journal Genome Research volume 14 issue 5 pages 963 70 year 2004 month May pmid 15123593 pmc 479127 doi 10.1101 gr.1864804 ref The Vega database is run and developed by the Wellcome Trust Sanger Institute . References reflist External links http vega.sanger.ac.uk Vega homepage Category Bioinformatics Category Biological databases bioinformatics stub ... more details
The Fiocruz Genome Comparison Project is a collaborative effort involving Brazil s Oswaldo Cruz Institute and IBM s World Community Grid , designed to produce a database comparing the gene s from many genome s with each other using SSEARCH http helix.nih.gov docs gcg ssearch.html . The program SSEARCH performs a rigorous Smith Waterman algorithm Smith Waterman alignment between a protein sequence and another protein sequence, a protein database, a DNA or a DNA library. The nature of the computation in the project allows it to easily take advantage of distributed computing . This, along with the likely humanitarian benefits of the research, has led the World Community Grid a distributed computing grid that uses idle computer clock time to run the Fiocruz project. All products are in the public domain by contract with WCG. Description The problem is that a very large information body structural, functional, cross references, etc. is attached to protein database entries. Once entered the information is rarely updated or corrected. This annotation of predicted protein function is often incomplete, uses non standard nomenclature or can be incorrect when cross referenced from previous sometimes incorrectly annotated sequences. Additionally, many proteins composed of several structural and or functional domains are overlooked by automated systems. The comparative information today is huge when compared to the early days of genomics. A single error is compounded and then made complex. The Genome Comparison Project performs a complete pairwise comparison between all predicted protein ... as a reference repository for the annotator community. The project provides invaluable data sources for biologists. The sequence similarity comparison program used in the Genome Comparison Project is called ... bioinfoteam templates archives GenomeComparison progress.html Genome Comparison Project http www.worldcommunitygrid.org projects showcase fgc viewFgcMain.do World Community Grid Project Category Genomics ... more details
Refimprove date November 2007 Flu The Influenza Genome Sequencing Project IGSP is an American based genomeproject aimed at improving the availability of genomic sequence data from influenza virus es and related information. The project is funded by the National Institute of Allergy and Infectious Diseases NIAID , a division of the National Institutes of Health NIH , and has been operating out of the NIAID Microbial Sequencing Center at The Institute for Genomic Research TIGR . Sequence information generated by the project has been placed into public domain through GenBank . Origins In early 2004 ... in Nature on the initial results of this project. References references http www.tigr.org flu Influenza Sequencing Project home page at TIGR http www.niaid.nih.gov dmid genomes mscs influenza.htm Influenza Genome Sequencing Project home page at NIAID http www.ncbi.nlm.nih.gov genomes FLU FLU.html ... subtype H5N1 Category Genome projects Category Influenza Genome Sequencing Project ... TIGR . Prior to this project, only a handful of flu genomes were publicly available. Citation needed ... influenza reveals the dynamic nature of viral genome evolution. E. Ghedin, N.A. Sengamalay, M. Shumway ... Salzberg. Nature 2005 , 1162 1166. ref Research goals The project is making all sequence data publicly ... influenza viruses . The project began prospective studies of the 2007 influenza season with collaborators ... The project completed its first genomes in March 2005 and has rapidly accelerated since. As of mid ... , H1N1 human , and H5N1 avian E. Ghedin et al., Nature 2005 , 1162 1166. . Affiliations The project ... University and Rob Webster of St. Jude s Children s Hospital in Memphis, Tennessee. In 2006 the project ..., Aly MM, et al. Genome analysis linking recent European and African influenza H5N1 viruses. Emerg ... College of Medicine also joined the project in 2006, contributing over 150 influenza B isolates ... the initial results of this project http cbcb.umd.edu salzberg docs NatureFluGenomeProjectReprint.pdf ... more details
The Chimpanzee GenomeProject is an effort to determine the DNA sequence of the Chimpanzee genome . It is expected ... 12552136 ref Starting the chimpanzee genomeproject Human and chimpanzee chromosome s are very ... 18 . After the completion of the Human genomeproject , a Common Chimpanzee genomeproject was initiated ... genomeproject suggest that when ancestral chromosomes 2A and 2B fused to produce human chromosome ... Search Chimpanzee GenomeProject 1 Chimpanzee GenomeProject div div div Common Chimpanzee Human evolutionary genetics Chromosome 2 human Human chromosome 2 Human GenomeProject Apes Category Primatology ... for comparative genomics journal Cytogenet. Genome Res. volume 105 issue 1 pages 157 8 year 2004 pmid ... times the typical difference between pairs of humans. Draft genome sequence of the common chimpanzee Analysis of the genome was published in Nature journal Nature on September 1, 2005, in an article produced ... in part by the National Human Genome Research Institute , one of the National Institutes of Health . The article marked the completion of the draft genome sequence Ref genome . A database Ref chimp ... genetic material, with about 2.7 percent of the genome now representing differences having been ... pii S0378 1119 04 00715 2 ref Results from the human and chimp genome analyses should help in understanding ... Consortium , show that 24 of the chimpanzee genome does not align with the human genome. There are 3 ... linked copies of the PGML FOXD CBWD genes exist elsewhere in the human genome, particularly near the p ... s are scattered through the human genome. References references note fusion cite journal author ... volume 73 issue 1 2 pages 37 52 year 1987 month August pmid 3333352 note genome cite journal url ... genome and comparison with the human genome author Chimpanzee Sequencing and Analysis Consortium journal ... 16136131 issue 7055 br cite journal title A genome wide comparison of recent chimpanzee and human ... Taxonomy Browser wwwtax.cgi?mode Info&id 9598&lvl 3&lin f&keep 1&srchmode 1&unlock genome ... more details
, Germany The Neanderthal genomeproject is a collaboration of scientists coordinated by the Max Planck ... sequencing sequence the Neanderthal genome . Founded in July 2006, the project published their results ... maps Neanderthal genome In May 2010, the project released a draft of their report on the sequenced ... External links http www.eva.mpg.de neandertal The Neandertal GenomeProject Website National Public ... www.msnbc.msn.com id 13955661 MSNBC Neanderthal genomeproject launches 22 November 2006. http news.bbc.co.uk ... Apes DEFAULTSORT Neanderthal GenomeProject Category Genome projects Category Human evolution Category ... del Neandertal fr Neanderthal genomeproject ka pt Genoma do Neandertal ru simple Neanderthal genomeproject sv Neanderthal genomeproject ... genome based on the analysis of four billion base pairs of Neanderthal DNA. The study determined that some ... evidence that elements of their genome remain in that of non African modern humans. ref cite journal author Green RE, Krause J, Briggs AW, et al. title A draft sequence of the Neandertal genome journal ... in Us ref Findings At roughly 3.2 billion base pair s, ref name Team in Germany maps Neanderthal genome cite news first Patrick last McGroarty title Team in Germany maps Neanderthal genome url http readingeagle.com ... genome is about the size of the modern human genome . According to preliminary sequences ... Man s Genome url http www.dw world.de dw article 0,,4024921,00.html publisher Deutsche Welle ..., but the project faced many difficulties, including the contamination of the samples by the bacteria ... and at the laboratory. ref name Team in Germany maps Neanderthal genome Additionally, in 2010, the announcement ... genome Neanderthals is around 202 bases. In contrast, the difference between chimpanzee s and modern ... author Krause J, Fu Q, Good JM, et al. title The complete mitochondrial DNA genome of an unknown ... into the modern human genome. ref name Timmer The speech related gene FOXP2 with the same ... more details
orphan date August 2009 The Immunological GenomeProject ImmGen is a collaborative scientific research project that is currently building a gene expression microarray database for all characterized immune cells in the mouse. The overarching goal of the project is to computationally reconstruct the genetic regulatory network in immune cells. All data generated as part of ImmGen are made freely and publicly available. The ImmGen project began in 2008 as a collaboration between several immunology and computational biology laboratories across the United States. The project has several phases, and is expected to take about three years to complete. Currently, raw data from the first phase is being released as it is generated on www.ImmGen.org. Project Background A true understanding of cell differentiation in the immune system will require a general perspective on the transcripts that are present in each cell type of the adaptive and innate immune systems, and how these profiles evolve through cell differentiation or activation by immunogenic or tolerogenic ligands. This project aims to establish the roadmap of these transcriptional states. Gene expression microarray compendium The first aim of ImmGen is to generate a compendium of whole genome microarray datasets for nearly all characterized cell populations of the adaptive and innate immune systems in the mouse, at major stages of differentiation and activation. This effort is being carried out by a group of collaborating immunology research laboratories across the U.S. Each of the laboratories brings a unique expertise in a parrticular cell lineage, and all are all employing standardized procedures for cell sorting. The compendium of microarray data will include as many immunologically relevant cell types as possible, from ... representation of data Project participants from Brown University s Computer Sciences Department ... has profiled approximately 180 cell populations in the mouse. Data access The project s status and detailed ... more details
Refimprove date February 2008 The Human Genome Diversity Project HGDP was started by Stanford University s Morrison Institute and a collaboration of scientists around the world. The resulting data sets ... to the Human GenomeProject , and has attempted to maintain a completely distinct identity. Studied ... American Regional Committee, Human Genome Diversity Project, published in the Houston Law Review ... disease research. The project has noted the need to record the genetic profiles of endogenous populations ... in biomedicine . Potential problems Denouncing the project since its outset, some indigenous communities ... could occur should the HGDP be completed. One major concern with the research project that they have ... race s genetic model. The rhetoric used by the HGDP and its participants to describe the project ... intentions of the project, infused in the discourse of the HGDP are both historical and problematic ... be obtained? Would individuals or groups fully understand the project s intentions, particularly ... targeted biological weapons from the project. Citation needed date March 2009 Since the project ... a big project with cultural categories as the overall sampling strategy would be a serious problem ... also prevent researchers from achieving many of the benefits that were to be gained from the project. Some members of the Human GenomeProject Human GenomeProject HGP argued in favor of engaging in diversity research on data gleaned from the Human Genome Diversity Project , although most agreed that diversity research should be done by the HGP and not as a separate project. A number of the principal collaborators with the HGDP have been involved in the privately funded The Genographic Project Genographic Project launched in April 2005 with similar aims. Current status There have been reports ... Marks http www.wired.com wired archive 5.07 updata.html The Human Genome Controversy Not to be confused ... Category Population genetics Category Human genome projects ... more details
The Epilepsy Phenome GenomeProject EPGP is a government funded study to identify gene s that influence the development of epilepsy and genes that affect the response to treatment. The study involves 13 major epilepsy centers and more than 150 scientists and clinical staff around the United States. The goal is to create a repository of clinical and genetic information on a select group of patients with epilepsy. The hope is that this information will reveal new insights and improve diagnosis and treatment. EPGP is funded by the National Institutes of Health via http www.ninds.nih.gov The National Institute for Neurological Disorders and Stroke NINDS . The long term goal of EPGP is to identify potential molecular targets that could be the basis of much more specific and effective treatments for patients who have epilepsy, and the prevention of epilepsy in those at risk. Background on Genes and Epilepsy Although heredity has been known since antiquity to cause epilepsy, the progress to date in identifying the genetic basis of epilepsy has been limited primarily to the discovery of single gene mutations that cause epilepsy in relatively rare families. For the more common types of epilepsy, heredity plays a subtler role, and it is thought that a combination of mutations in multiple genes likely determine an individual s susceptibility to seizures, as well as the responsiveness to antiepileptic medications. EPGP Phenotyping The approach to teasing apart the more complicated genetic factors in epilepsy requires a very large number of patients whose epilepsy has been extremely well characterized. EPGP investigators will be enrolling 3,750 patients and 3,000 controls over the course of the study. Details about seizure types, EEGs, imaging studies, and effects of treatment will be collected and archived in a central data repository, and all participants will be asked to submit ..., Sabatti C. The human phenome project. Nat Genet. 2003 May 34 1 15 21 External links http www.epgp.org ... more details
A list of attributes used by the Music GenomeProject for classifying music, sorted by categories. Dynamic list Structures Musical composition Composition Basic Rock Song Structures Buildup Breakdown Chromaticism Chromatic Harmonic Structure Epic Buildup Breakdown Groove music Groove Based Composition Interesting Song Structure Melodic Songwriting Minimalist Arrangements Orchestral Arranging Repetitive Song Structure Subtle Buildup Breakdown Big Band Arrangements Lead Big Band Rhythm Meter music Meter Danceable Groove music Grooves Four Four Time Signature Hard Swingin Rhythm Heavy Syncopation Intricate Rhythm Rhythms Meter music Meter Complexity Mild Rhythmic Syncopation Triple metre Triple Meter Style Tuplet Triple Note Feel Twelve Eight Time Signature Syncopation Unsyncopated Musical ensemble Ensemble Rhythms Use of Groove music Groove Varying Tempo and Time signature Time Signatures Rhythm Rhythmic Intro Ostinato Acoustic music Acoustic Sonority Acousti Synthesizer synthetic Sonority Chord Progression Chordal Patterning Dominant Use of Riffs Electro Synthetic Sonority Extensive Vamping Highly Synthetic Sonority Intricate Melodic Phrasing Knack for Hook music Catchy Hooks Melodic Songwriting Modal Harmony Overall Meditative Sound Repetitive Verse chorus form Chorus Repetitive Melodic Phrasing Repetitive Verse chorus form Verse Synth acoustic Sonority Synth electric Sonority Tonality Tonal Harmony Roots Acid Jazz Roots Afro Latin Roots Basic Rap Roots Blues Roots Caribbean Roots Classic Jazz Roots Club Rap Roots Cool Jazz Roots Country Roots Disco Roots East Coast Rap Roots Electronica Roots Folk Roots Funk Roots Hard Bop Roots Hard Rock Roots Hawaiian Roots House music ... Swing elements References http www.pandora.com mgp.shtml The Music GenomeProject short historical statement by Tim Westergren Category Dynamic lists Music GenomeProject attributes Category Music related lists Music GenomeProject attributes it Lista degli attributi del Music GenomeProject ... more details
and mapping details Genomeproject The Human GenomeProject was organized to Physical map genetics ... nucleotide sequence of a viral RNA genome Bacteriophage bacteriophage MS2 . The first DNA genomeproject ... in navigating around the genome. A fundamental step in the Human genomeproject was the release of a detailed ... DNA From The Beginning http www.genome.gov 10001772 All About The Human GenomeProject &mdash ... NCBI Entrez GenomeProject database http www.ncbi.nlm.nih.gov About primer genetics genome.html ... up the diploid genome of human male. The mitochondrial chromosome is not shown. In modern molecular biology and genetics , the genome is the entirety of an organism s hereditary information. It is encoded either in DNA or, for RNA virus many types of virus , in RNA . The genome includes both the gene s and the Non coding DNA non coding sequences of the DNA RNA. ref Ridley, M. 2006 . Genome . New ... genome means I become, I am born, to come into being . The Oxford English Dictionary ... existed, such as biome and rhizome , forming a vocabulary into which genome fits systematically. ref ... typically eukarya the gamete has half of the number of chromosome of the somatic cell and the genome ... , likewise constitute the genome . The term genome can be applied specifically to mean that stored on a complete set of cell nucleus nuclear DNA i.e., the nuclear genome but can also be applied to that stored within organelles that contain their own DNA, as with the mitochondrial genome or the chloroplast genome . Additionally, the genome can comprise nonchromosomal genetic elements such as virus ... 144329 1 ref When people say that the genome of a sexual reproduction sexually reproducing species ... sexes. Even in species that exist in only one sex, what is described as a genome sequence ... makeup is sometimes used conversationally to mean the genome of a particular individual or organism ... genome . An analogy to the human genome stored on DNA is that of instructions stored in a book ... more details
Wiktionarypar genomeGenome may refer to Genome , the totality of genetic material carried by an organism Human genome Bovine genome Mitochondrial genomeGenome book , a 1999 popular science book by Matt Ridley Genome journal , the scientific journal of the Genetics Society of Canada Genome novel , science fiction novel by Sergey Lukyanenko G NOME , a mech PC game created by 7th Level Genome, a superior humanoid race in Square s console role playing game Final Fantasy IX Chromosome genetic algorithm , the parameter set of a proposed solution to a problem posed to a genetic algorithm Lord Genome , A character from the anime series Tengen Toppa Gurren Lagann Exterro, Inc. Fusion Genome , A software solution for the legal industry. See also Genome size Genomeproject Genomics Category Genome projects Disambig ru simple Genome disambiguation ... more details
orphan date June 2009 Wikify date June 2009 Korean genome refers to the first Korean human genome sequenced and publicized in Dec. 2008. The donor of the genome is Dr. Seong Jin Kim who used to be the director of the Lee Gilya Cancer and Diabetes Institute LCDI in Korea. It was the second Asian genome sequenced after YH Dr. Yang Huanming s . The research paper on the first genome was published in Genome Research May 26th 2009. The analysis details have been available from http koreangenome.org. The project was a result of a joint research among LCDI, KOBIC Korean Bioinformation Center , and NRSDI National Reference Standards Data Institute of Korea. The name of the genome was called KOREF until it was changed to SJK. SJK was registered in NCBI on 2nd March and publicly available since then. The location of the data is ftp bioftp.org BiO Store Genome . The second Korean genome was published in Nature July 8th 2009 by a Korean sequencing team and an analysis team NCGR, New Mexico in the US. See also Genomics Personal genomics Korean Personal GenomeProject KPGP External links http koreangenome.org Koreangenome.org The Korean Genome openfree home page. http koreangenome.org Koreangenome.org The Korean Genome site. http personalgenomicsinstitute.org personalgenomicsinstitute.org A Korean Personal Geomics Institute. http genome.cshlp.org content early 2009 05 26 gr.092197.109.full.pdf html The Genome Research on line issue of the first Korean Genome http kpgp.kr Korean Personal GenomeProject in Korean language. http Koreangenome.kr Korean GenomeProject home page in Korean language. Category Human genome projects Category Science and technology in Korea ... more details
A genome browser is a graphical interface for display of information from a biological database for genomic data. Genome browsers enable researchers to visualize and browse entire genomes most have many ..., with genome coordinates on one axis and the location of annotations indicated by a space filling graphic to show the occurrence of genes, etc. List of genome browsers PLEASE KEEP IN ALPHABETICAL ORDER http apollo.berkeleybop.org current index.html Apollo Genome Annotation Curation Tool A cross platform, Java based standalone genome viewer with enterprise level functionality and customizations. The standard for many model organism databases. http www.broad.mit.edu annotation argo Argo Genome Browser A free and open source standalone Java based genome browser for visualizing and manually annotating whole genomes. http www.avadis ngs.com Avadis NGS combines a genome browser and set of data ... Sciences http diprogb.fli leibniz.de DiProGB The Dinucleotide Properties Genome Browser https dnanexus.com genomes hg18 public browse DNAnexus Flash based interactive genome browser, as well as next gen sequence analysis and visualization. http www.ensembl.org Ensembl The Ensembl Genome Browser Sanger ... Model Organism Database GMOD GBrowse Project The Genomic HyperBrowser focuses on statistical browsing of elements along the genome. http www.genostar.com en genostar software genomic analysis tools ... from any kind of file EMBL, GenBank, Fasta, GFF... http genplay.einstein.yu.edu GenPlay A genome viewer and analyzer developed in Java at Albert Einstein College of Medicine. Integrated Genome Browser IGB Open source and free Java based desktop genome viewer for visualizing next gen sequence and microarray data. http img.jgi.doe.gov Integrated Microbial Genomes IMG system by the DOE Joint Genome Institute http johnsonlab.ucsf.edu sj mochiview start MochiView Genome Browser https www.nextbio.com b gb genomeBrowser.nb NextBio Genome Browser an interactive application that lets visualization of physical ... more details
. ref Dryden, Jim. http news.wustl.edu news Pages 1775.aspx Human GenomeProject completed. Washington University School of Medicine. 2003 03 23. ref Projects The Cancer Genome Atlas compares DNA sequences .... Human Microbiome Project is sequencing the genomes of microbes involved in human health and disease. 1000 Genomes Project seeks to catalog the immense human variation written into the genetic code. Washington University Cancer Genome Initiative provides for hundreds of tumor and normal sample genomes to be sequenced. Pediatric Cancer GenomeProject is a collaboration with St. Jude Children s Research ... cancers. ref http www.pediatriccancergenomeproject.org site Pediatric Cancer GenomeProject website ...Infobox Laboratory name The Genome Center motto image established 1993 budget debt research field Genomics ... genome.wustl.edu logo footnotes The Genome Center formerly the Genome Sequencing Center at Washington ... in the United States . ref Arbanas, Caroline. http news.wustl.edu news Pages 8277.aspx Genome center ... University School of Medicine , The Genome Center is creating, testing and implementing new ... as evolution and the biology of other organisms. History Founded in 1993, The Genome Center began as a key player in the Human GenomeProject , ultimately contributing more than 25 percent of the finished sequence. ref Purdy, Michael. http news.wustl.edu news Pages 4097.aspx Genome center is major contributor to finished human genome sequence. Washington University School of Medicine. 2004 10 21. ref Following completion of the working draft of the human genome in 2000, and the finished human genome sequence in 2003, The Genome Center turned its sequencing and analysis skills to determining ... related disorders to help individualize patient treatment. Staff The Genome Center employs over 300 ... laboratory at the Washington University School of Medicine is among the world s leaders in genome ... Development group at The Genome Center has played a pivotal role in the evaluation, optimization ... more details
countries after six years of effort. The size of the bovine genome is 3 Gb 3 billions of base ... s and rodent s but not identified in humans. ref name Cattle genome yahoo cite news url http news.yahoo.com s ap 20090423 ap on sc us sci bovine basics title Cow genome unraveled in bid to improve meat ... Gill first V. title Cow genome to transform farming url http news.bbc.co.uk 2 hi science nature 8014598.stm ..., R.A. et al . Bovine HapMap Consortium title Genome Wide Survey of SNP Variation Uncovers the Genetic ... science.1167936 pmid 19390050 pmc 2735092 ref See also Cattle Hereford cattle DNA Genome International HapMap Project List of sequenced eukaryotic genomes Retrotransposon Composite SINE Transposons Composite SINE transposons in the Bovine genome Bovine genome database References Reflist External ..., 04 24 09 Cattle stub Genetics stub Category Cattle Category Genome projects ... more details
The Movie Genome is an approach to indexing movies based on attributes in order to create movie catalogs with extensive, detailed data about each title. Description The Movie Genome concept is borrowed from the Human GenomeProject , a scientific project to identify and map all human genes . Similarly, a Movie Genome, as used by semantic movie discovery engine Jinni discovery service Jinni ref cite web title Hands on Jinni, a polished movie recommendation service url http arstechnica.com web news 2009 01 hands on jinni a polished movie recommendation service.ars publisher ArsTechnica accessdate 2009 01 26 ref , identifies and indexes multiple genes elements and aspects of a movie. A comparable initiative is the Music GenomeProject , intended to capture the essence of music at the fundamental level. The Music Genome technology is used by Pandora music service Pandora to play music for Internet users based on their preferences. Movie Genome attributes might include mood, tone, plot, and structure. ref cite web title Jinni s Genius Way to Recommend Movies url http mashable.com 2009 02 11 jinni publisher Mashable accessdate 2009 02 11 ref Jinni s Movie Genome has a taxonomy created by film professionals, while titles are automatically indexed using a mixture of metadata and reviews and a proprietary Natural Language Processing solution to assign semantic tags to content and users. ref cite web title Jinni Wants to Be Pandora for Movies url http www.readwriteweb.com archives jinni pandora for movies.php publisher ReadWriteWeb accessdate 2009 01 22 ref Applications The Movie Genome has several applications in the area of movie discovery. It can power search engines , notably semantic search , ref cite web title Semantic movie search engine Jinni url http www.pandia.com sew 1495 ... each title in a Movie Genome can also support an item based recommendation engine ref cite web .... Examples Jinni discovery service Jinni has created a Movie Genome by taking a taxonomic approach ... more details
Notability date May 2009 The Evolution of the Genome is a book edited by T. Ryan Gregory Dr. T. Ryan Gregory of the University of Guelph , in Guelph , Ontario , Canada , covering a wide range of topics in the study of genome evolution . The book includes chapters by 16 authors and deals with the topics of genome size evolution , selfish DNA genomic parasites transposable elements and B chromosomes , polyploidy , gene duplication , ancient genome duplication , comparative genomics , and macroevolution . It was released in December 2004 by Elsevier , ISBN 0 12 301463 8. Chapters and authors Image TheEvolutionoftheGenome.jpg thumb right Part I The C value enigma Chapter 1 Genome size evolution in animals by T. Ryan Gregory Chapter 2 Genome size evolution in plants by Michael D. Bennett and Ilia J. Leitch Part II The evolution of genomic parasites Chapter 3 Transposable elements by Margaret G. Kidwell Chapter 4 B chromosomes by Juan Pedro M. Camacho Part III Duplications, duplications... Chapter 5 Small scale gene duplications by John S. Taylor and Jeroen Raes Chapter 6 Large scale gene and ancient genome duplications by Yves Van de Peer and Axel Meyer Part IV ...and more duplications Chapter 7 Polyploidy in plants by Jennifer Tate, Douglas E. Soltis, and Pamela S. Soltis Chapter 8 Polyploidy in animals by T. Ryan Gregory and Barbara K. Mable Part V Sequence and structure Chapter 9 ... in prokaryotes by T. Ryan Gregory and Rob DeSalle Part VI The genome in evolution Chapter 11 Macroevolution and the genome by T. Ryan Gregory Trivia The cover contains numerous images of animal s, plants ... Academic Press editor in charge of the project left the company while the book was being produced ... Animal Genome Size Database http www.rbgkew.org.uk cval homepage.html Plant DNA C values Database http www.zbi.ee fungal genomesize index.php Fungal Genome Size Database http www.genomesonline.org ... Microbial Resource http www.genomenewsnetwork.org Genome News Network DEFAULTSORT Evolution Of The Genome ... more details
Human GenomeProject . Most individuals with their entire genome sequenced, such as James D. Watson , had their genome assembled in this manner. ref name Watson ref The exception to this is J ...Image Wellcome genome bookcase.png thumb right 250px The first printout of the human reference genome presented as a series of books, displayed at the Wellcome Collection , London A reference genome also ... of DNA from a number of donors, reference genome s do not accurately represent the genetic code ... from each donor. For example GRCh37 , the Genome Reference Consortium human genome build 37 is derived ... an appointment with the project s genetic counselors and donate blood from which DNA was extracted. As a result of how the DNA samples were processed, about 80 percent of the reference genome came ... The ABO blood group system differs among humans, but the human reference genome contains only an ABO gene O allele although the other alleles are Genome annotation Genome annotation annotated . ref name2 Guide cite book title A short guide to the human genome last Scherer first Stewart authorlink ... Juane 2010 ref As the cost of DNA sequencing falls, and new full genome sequencing technologies emerge, more genome sequences continue to be generated. Reference genomes are typically used as a guide ... of a genome, the reference provides a good approximation of the DNA of any single individual. But in regions ... and the major urinary proteins of mice, the reference genome may differ significantly from other ... build 36 and Watson s genome revealed 3.3 million single nucleotide polymorphism differences, while about 1.4 percent of his DNA could not be matched to the reference genome at all. ref name NYT cite news title Genome of DNA Pioneer Is Deciphered last Wade first Nicholas publisher New York Times ... The complete genome of an individual by massively parallel DNA sequencing pmid 18421352 author Wheeler ... and improved by the Genome Reference Consortium GRC , a group of less than 20 scientists from ... more details
genome by the ENCODE pilot project journal Nature volume 447 pages 799 816 year 2007 doi 10.1038 ... GenomeProject file ref at Project Gutenberg http www.gutenberg.org browse authors h a856 , zipped ... The Human GenomeProject and a parallel project by Celera Genomics each produced and published a haploid ... genomes had not been sequenced in the Human GenomeProject to protect the identity of volunteers who ... population. ref Cite web url http www.genome.gov 11006943 title Human GenomeProject Completion Frequently ... in the human genome is being undertaken by the International HapMap Project . The genomic loci and length ... physician trained in clinical medical genetics. The results of the Human GenomeProject .... With the advent of the Human Genome and International HapMap Project , it has become feasible ... evolution Chimpanzee GenomeProject Comparative genomics studies of mammalian genomes suggest that approximately ... Human genetic engineering Human Genome Sequencing Center Noncoding DNA The Genographic Project Mitochondrial ... http www.ensembl.org Ensembl The Ensembl Genome Browser Project http www.ncbi.nlm.nih.gov mapview map ... Genome Browser . http www.ornl.gov sci techresources Human Genomeproject info.shtml Human GenomeProject ... genome is the genome of Homo sapiens , which is stored on 23 chromosome pairs. 22 of these are autosome ... . The haploid human genome occupies a total of just over 3 billion DNA base pair s. The Human GenomeProject HGP produced a reference genome reference sequence of the euchromatin euchromatic human genome, which is used worldwide in biomedical science s. The haploid human genome contains ca. 23,000 ... Pathogenesis, 2 September 2009 ref ref name IHSGC2004 Cite journal author International Human Genome Sequencing Consortium title Finishing the euchromatic sequence of the human genome. journal Nature ... nature journal v431 n7011 full nature03001.html ref In fact, only about 1.5 of the genome codes ... Genome Sequencing Consortium title Initial sequencing and analysis of the human genome. journal Nature ... more details
never come across such talented students. See also Genomeproject Structural genomics References reflist External links http www.jutegenome.org Jute genome Homepage DEFAULTSORT Jute Genome Category Genome projects ... genome sequencing which will contribute to improving jute fibre. History It all began in February ... of Bangladeshi Biotechnologists regarding the possibility of sequencing the jute genome. The Bangladeshi science community, which was already looking into the possibility of getting the jute genome ... over 100 billions of A, C, G, and Ts of Jute Genome sequencing data were used for the draft assembly. Several open source and commercial genome assembly and annotation pipelines were used to assemble and analyze the raw data. To validate draft genome, transcriptome analysis was also carried out ... of genome sequencing. The audience included many students and faculty from many departments of the biological ... audience helped to form the first working body more than two years before the actual project kicked ... more details
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