| Accepted[4] |
|-
| Addison's disease |
Accepted[4] |
|-
| Ankylosing spondylitis |
Accepted[4] |
|-
| Antiphospholipid antibody syndrome (APS) |
Accepted[4] |
|-
| Autoimmune hemolytic anemia |
Accepted[5] |
II
|-
| Autoimmune hepatitis |
Accepted[4] |
|
Anti-Smooth Muscle Actin
|-
| Autoimmune inner ear disease |
Suspected[6] |
|-
| Bullous pemphigoid |
Accepted[5] |
II |
Anti-Bullous Pemphigoid Antigen 1 and 2 (Hemidesmosome antigens)
|-
| Coeliac disease |
Accepted[7][8][9] |
IV |
Anti-transglutaminase
|-
| Chagas disease |
Suspected[10] |
|-
| Chronic obstructive pulmonary disease |
Suspected[11] [12] |
|-
| Dermatomyositis |
Accepted[13] |
|-
| Diabetes mellitus type 1 |
Accepted[4] |
IV
|-
| Endometriosis |
Suspected[14] |
|-
| Goodpasture's syndrome |
Accepted[4] |
II |
Anti-Basment Membrane Collagen Type IV Protein
|-
| Graves' disease |
Accepted[4] |
II
|-
| Guillain-Barré syndrome (GBS) |
Accepted[4] |
IV |
Anti-ganglioside
|-
| Hashimoto's disease |
Accepted[4] |
IV |
|-
| Hidradenitis suppurativa |
Suspected[15] |
|-
| Idiopathic thrombocytopenic purpura |
Accepted[4] |
II
|-
| Interstitial cystitis |
Suspected[16] |
|-
| Lupus erythematosus |
Accepted[4] |
III
|-
| Morphea |
Suspected[17] |
|-
| Multiple sclerosis |
Accepted[4] |
IV |
Anti-Myelin Basic Protein
|-
| Myasthenia gravis |
Accepted[4] |
II
|-
| Narcolepsy |
Suspected[18] |
|-
| Neuromyotonia |
Suspected[19] |
|-
| Pemphigus Vulgaris |
Accepted[4] |
II |
Anti-Desmogein 3
|-
| Pernicious anaemia |
Accepted[20] |
II |
|-
| Polymyositis |
Accepted[13] |
|-
| Primary biliary cirrhosis |
Accepted[21] |
|
Anti-p62, Anti-sp100, Anti-Mitochondrial(M2)
|-
| Rheumatoid arthritis |
Accepted[4] |
III |
Rheumatoid factor
|-
| Schizophrenia |
Suspected[22][23][24] |
|-
| Scleroderma |
Suspected[17] |
|
Anti-topoisomerase
|-
| Sjögren's syndrome |
Accepted[4] |
|-
| Temporal arteritis (also known as "giant cell arteritis") |
Accepted[4] |
IV |
|-
| Vasculitis |
Accepted[5] |
III
|-
| Vitiligo |
Suspected[25][26] |
|-
| Wegener's granulomatosis |
Accepted[27] |
|
Anti-neutrophil cytoplasmic(cANCA)
|